KELLY MCEVERS, HOST:
Every handful of dirt in your backyard probably contains billions of microscopic living things. The planet depends on these microbes. But scientists don't even have names for most of them. Today, researchers announced in the journal Science they have made progress in exploring this largely unknown world right underneath our feet. NPR's Dan Charles reports.
DAN CHARLES, BYLINE: Noah Fierer at the University of Colorado, Boulder, wants to introduce us to all the microorganisms living in the ground.
NOAH FIERER: They do a lot of important things, directly or indirectly, for us. And I hope they get the respect they deserve.
CHARLES: Microbes create fertile soil, help plants grow, consume and release carbon dioxide, oxygen, other vital elements. But they do it all anonymously. Scientists don't know who they are or anything else about them, really.
FIERER: What they're doing in soil, how they're surviving in soil, what they look like.
CHARLES: They've been impossible to study partly because most of them refuse to grow anywhere but in the dirt.
FIERER: So we can't take them out of soil and study them in the lab.
CHARLES: This problem is so hard. Some scientists call the vast world of microbes a black box. You can't look inside. But Fierer and other scientists have come up with a way to open up the box just a little. They collect samples of soil and they just extract all the DNA from it, all the DNA from everything living in there. And there is a lot going on even in a small sample.
FIERER: Thousands of bacterial species can be found in a given teaspoon of soil, for example.
CHARLES: They study the DNA in each sample. And they're able to tell two things - how many different kinds of microbes live in that sample and how common each kind is. And Fierer discovered something interesting - out of all the different kinds of soil microbes out there, there's a relatively small group that seems to dominate. These microbes show up in large numbers in soil samples from deserts, grassy prairies, forests. Fierer made a list of 500 of the most common microbes. If we want to understand the whole soil ecosystem, he says, let's start by trying to understand these dominant species. It's a most wanted list, but it's also a list of question marks.
FIERER: Most of these microorganisms that made our most wanted list, they don't have a species name. They are undescribed.
CHARLES: Janet Jansson from the Pacific Northwest National Laboratory in Richland, Wash., is helping to lead a huge scientific collaboration called the Earth Microbiome Project. She says scientists will be looking closely at these commonly found microbes.
JANET JANSSON: They probably play an important role because they are dominant and ubiquitous. And so I really think that's what the next step has to be, is characterizing, you know, what do they do? And how are they impacted by change - climate change, for example?
CHARLES: It may be possible to piece together the entire genetic sequence of these microbes, she says. So even if you can't grow them in a lab, scientists may be able to figure out what they're doing just from looking at their genes. And any of these soil microbes, whether they're common or rare, could be the source of new biotechnologies, she says.
JANSSON: You know, new enzymes that remain to be discovered, novel antibiotics that remain to be discovered.
CHARLES: Treasures hidden in the ground. Dan Charles, NPR News.